Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907430.1_cds_XP_016457568.1_51278
CDS Infomation

[gene=LOC107781388] [db_xref=GeneID:107781388] [protein=putative amidase C869.01] [protein_id=XP_016457568.1] [location=complement(join(46628..46987,47969..48164,48260..48487,48897..49111,50533..50816,50918..51161))] [gbkey=CDS]
Sequence

ATGTCTGTTCTTGCCATTCTATTCATTTGTTTGTGCATGATATTGTCCAACTTCAATGGG
AATATTAGTGAGGCAAAAACATTCTCATTTGAGGAAATAACTGTCAGTGATATTCAAATA
GCTTTCAAGCAAAACAGACTGAGCTCAAGGCAACTTGTTGAGTACTATCTAGGCCAAATT
CAAAGAGCTAATCCAGTTCTTAAAGGAATCATAGAAGTGAATCCAGATGCACTATATCTA
GCAGATAAAGCTGACCAAGAACGTAAAGCGAAGACGCCAAAATCATTATCCAGGCTACAT
GGTATACCTGTTCTTGTTAAGGACAACATTGCAACTAAGGATAAGCTTAACACAACAGCT
GGATCTTTAGCTCTTCTTGGATCCATCGTACCACAAGATGCTGGTGTAGTCAAGAAGTTG
AGGAAAGTTGGGGCTATCATACTTGGCAAGGCAACTATGACTGAATGGGCTGCTTTTAGA
TCTGGAGAGTTGCCTAGTGGTTGGAATGGTAGACTTGGCCAAGCTCTGAATCCTTATGTA
GCAAGTGCTGATCCATCAGGATCAAGCACTGGTTCAGCAACATCAGTAGCAGCAAACATG
GCAGCAGTAACACTGGGGACAGAAACAGCAGGCTCCATTCTATCTCCGTCAAGTGCTAAT
TCTGTTGTTGGAATCAAACCAACTGTAGGCCTCACCAGCAGGGCCGGCGTTGTCCCAATT
TCACATAGGCAAGACACTGTTGGGCCAATCTGCAGGACAGTATCTGATGCTGTTGAGGTT
CTTAATGCCATCGTTGGTTTCGATCAAGATGACTCACCTGCAACGAAACAGGCTTCCACT
TACATTCCTCGTGGTGGGTACCGGCAATTTCTTAAGGCTGATGGGCTCAGAGCTAAGAGA
TTGGGAATTACAAAGGACCTTTTTAGCTCAGATGATATCAAGGCTTACCAACACCATTTT
AACACCTTAAGGCAAAAAGGAGCAGTGTTAGTTGACAAACTGGAAATACCTAACATCAAC
TTGGTCTACACCGCTGTGTTTGATGCTCAAGGCATTGCACTGACCGCCGAATTCAAGATG
GACCTAAATGCATACCTTAAAAAGTTAGTCCACTCTCGAGTCCGATCCTTGGCAGATGTT
ATAGCCTTCAACAAGATTTCAGCTTCGGAAAACGTCAAAAAATTTGGTCAAGATACTATG
TTGGAAGCTGAGAAGACAAATGGAATTGGGAAATTGGAAAGGGAGGCACTGAAGAACATA
ACAAAAGCATGTAAATATGGGTTTGAGAAAATGATGAAAGATAATAAATTAGATGCTTTG
ATGTCACCTGGTGCAAACATTGCTGGTCTTCTCGCAATTGGTGGTTATCCAGGGATCAAT
GTACCTGCTGGTTATGATAAAAATGGAGTTCCATTTGGGATTTCCTTTGGAGGACTAAAG
GGTTCTGAACCTACACTCATTGAGATTGCATATGGCTTTGAACAAGCAACTCATATCAGG
AAGCCCCCTCCTTCACATCCTCGCTAG

Peptide Sequence

PEP ID

XP_016457568.1
PEP Infomation

PREDICTED: putative amidase C869.01 [Nicotiana tabacum]
Sequence

MSVLAILFICLCMILSNFNGNISEAKTFSFEEITVSDIQIAFKQNRLSSRQLVEYYLGQI
QRANPVLKGIIEVNPDALYLADKADQERKAKTPKSLSRLHGIPVLVKDNIATKDKLNTTA
GSLALLGSIVPQDAGVVKKLRKVGAIILGKATMTEWAAFRSGELPSGWNGRLGQALNPYV
ASADPSGSSTGSATSVAANMAAVTLGTETAGSILSPSSANSVVGIKPTVGLTSRAGVVPI
SHRQDTVGPICRTVSDAVEVLNAIVGFDQDDSPATKQASTYIPRGGYRQFLKADGLRAKR
LGITKDLFSSDDIKAYQHHFNTLRQKGAVLVDKLEIPNINLVYTAVFDAQGIALTAEFKM
DLNAYLKKLVHSRVRSLADVIAFNKISASENVKKFGQDTMLEAEKTNGIGKLEREALKNI
TKACKYGFEKMMKDNKLDALMSPGANIAGLLAIGGYPGINVPAGYDKNGVPFGISFGGLK
GSEPTLIEIAYGFEQATHIRKPPPSHPR

Transcript Sequence

Gene sequence data has not been registered.